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DB built by FlyBase

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Gene: plx FBgn0261261

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Description

pollux

Gene Synonyms

Location

Primary_assembly 3R: 5,685,855-5,712,837 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 93 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
plx-RC	FBtr0302091	6225	1572aa	FBpp0291301	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ52	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
plx-RE	FBtr0334947	6315	1518aa	FBpp0306963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGK7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
plx-RA	FBtr0302090	5465	1379aa	FBpp0291300	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AWQ6 Q9VNG9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
plx-RD	FBtr0302092	5372	1406aa	FBpp0291302	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EC84 Q8IPP5 Q9TY11	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
plx-RF	FBtr0334948	5210	1352aa	FBpp0306964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG76 Q24193	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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