Summary
- Splice variants
- Transcript comparison
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- GO: Biological process
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DB built by FlyBase

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Gene: fok FBgn0263773

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Description

fledgling of Klp38B

Gene Synonyms

Location

Primary_assembly 2L: 20,079,270-20,085,070 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
fok-RC	FBtr0310559	1903	129aa	FBpp0302696	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MYU0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
fok-RA	FBtr0310558	1205	129aa	FBpp0302695	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MYU0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
fok-RD	FBtr0310560	696	103aa	FBpp0302697	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2J5T9 M9PGA8	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
fok-RE	FBtr0310561	394	69aa	FBpp0302698	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRX2	-	-

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Summary

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