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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- Variant table
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- Structural variants
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- Gene history

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DB built by FlyBase

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Gene: CG44250 FBgn0265185

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Gene Synonyms

Location

Primary_assembly 2R: 12,950,404-12,952,293 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 52 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG44250-RC	FBtr0339105	1100	297aa	FBpp0308250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6SV36	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG44250-RB	FBtr0339104	1067	286aa	FBpp0308249	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SZ28	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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