Summary
- Splice variants
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DB built by FlyBase

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Gene: CG45002 FBgn0266354

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Gene Synonyms

Location

Primary_assembly X: 16,969,069-17,066,732 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants), 40 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG45002-RE	FBtr0344098	7072	1098aa	FBpp0310523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DNM8 Q8IR04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG45002-RG	FBtr0344100	7375	1082aa	FBpp0310525	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX90	-	-
CG45002-RF	FBtr0344099	7375	969aa	FBpp0310524	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHX1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG45002-RH	FBtr0344101	7149	985aa	FBpp0310526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0Z7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG45002-RJ	FBtr0344096	7085	982aa	FBpp0310521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JKT7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG45002-RD	FBtr0344097	7072	985aa	FBpp0310522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0Z7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG45002-RI	FBtr0344102	7053	974aa	FBpp0310527	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JFI2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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