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- Splice variants
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DB built by FlyBase

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Gene: tea FBgn0285892

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Description

telomere ends associated

Gene Synonyms

Location

Primary_assembly 2R: 9,891,955-9,898,513 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tea-RE	FBtr0300921	5812	1878aa	FBpp0290143	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z818	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tea-RC	FBtr0300919	5806	1876aa	FBpp0290141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH25 Q95TR1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tea-RB	FBtr0088381	5297	1693aa	FBpp0087469	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z817 Q95TS3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tea-RD	FBtr0300920	5291	1691aa	FBpp0290142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH24	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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