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DB built by FlyBase

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Gene: Ald1 FBgn0000064

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Description

Aldolase 1

Gene Synonyms

Location

Primary_assembly 3R: 26,254,069-26,261,591 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 10 transcripts (splice variants), 105 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ald1-RE	FBtr0085000	1747	363aa	FBpp0084373	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3G1 Q86NZ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ald1-RB	FBtr0084994	2636	361aa	FBpp0084367	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV14 F3YDA0 P07764	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ald1-RM	FBtr0339614	2102	361aa	FBpp0308680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV14 P07764	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ald1-RI	FBtr0114544	1736	363aa	FBpp0113036	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V3G1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ald1-RH	FBtr0085001	1618	363aa	FBpp0089214	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDE2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ald1-RL	FBtr0310661	1615	363aa	FBpp0302781	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDE2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ald1-RJ	FBtr0306657	1614	363aa	FBpp0297612	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDB5 F3YDE2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ald1-RD	FBtr0084999	1483	361aa	FBpp0084372	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV14 P07764	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ald1-RK	FBtr0310660	1472	361aa	FBpp0302780	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV14 P07764	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ald1-RC	FBtr0084995	1279	361aa	FBpp0084368	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV14 P07764	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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