chiffon
Primary_assembly 2L: 16,342,430-16,352,628 reverse strand.
BDGP6.32:AE014134.6
This gene has 4 transcripts (splice variants) and 66 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| chif-RA | FBtr0080838 | 6624 | 1711aa | FBpp0080396 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NK54 | NM_001273570.2 NM_078859 NM_078859.4 NM_165156.3 NP_001260499.1 NP_523583 NP_523583.2 NP_723965.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| chif-RE | FBtr0475053 | 6575 | 576aa | FBpp0423267 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6H2EHD1 | - | - |
| chif-RB | FBtr0080839 | 6575 | 1695aa | FBpp0080397 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G2J5V4 M9PD16 | NM_001273570.2 NM_165156 NM_165156.3 NP_001260499.1 NP_723965 NP_723965.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| chif-RD | FBtr0321313 | 6170 | 1695aa | FBpp0302856 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PD16 | NM_001273570 NM_001273570.2 NM_165156.3 NP_001260499 NP_001260499.1 NP_723965.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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