Summary
- Splice variants
- Transcript comparison
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Sequence
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- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: numb FBgn0002973

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Description

numb

Gene Synonyms

Location

Primary_assembly 2L: 9,437,469-9,464,184 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 78 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
numb-RD	FBtr0339526	4395	556aa	FBpp0308609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCN6 P16554	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
numb-RA	FBtr0079822	3309	556aa	FBpp0079420	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCN6 P16554	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
numb-RB	FBtr0079821	2956	515aa	FBpp0079419	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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