raspberry
Primary_assembly X: 10,744,502-10,749,097 forward strand.
BDGP6.32:AE014298.5
This gene has 5 transcripts (splice variants) and 87 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| ras-RF | FBtr0474163 | 2415 | 590aa | FBpp0423162 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4D6K3W6 | NM_001369990 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ras-RD | FBtr0332294 | 2810 | 537aa | FBpp0304573 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V488 Q07152 | NM_001272498 NM_001272498.2 NM_079907.7 NM_167240.3 NM_167241.3 NP_001259427 NP_001259427.1 NP_524646.5 NP_727441.1 NP_727442.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ras-RA | FBtr0071495 | 2519 | 537aa | FBpp0071424 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V488 Q07152 | NM_001272498.2 NM_079907.7 NM_167240 NM_167240.3 NM_167241.3 NP_001259427.1 NP_524646.5 NP_727441 NP_727441.1 NP_727442.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ras-RE | FBtr0343043 | 2415 | 537aa | FBpp0309791 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V488 Q07152 | NM_001272498.2 NM_079907 NM_079907.7 NM_167240.3 NM_167241.3 NP_001259427.1 NP_524646 NP_524646.5 NP_727441.1 NP_727442.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ras-RC | FBtr0071494 | 2321 | 537aa | FBpp0071423 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V488 A9YKX5 F6J5F7 Q07152 | NM_001272498.2 NM_079907.7 NM_167240.3 NM_167241 NM_167241.3 NP_001259427.1 NP_524646.5 NP_727441.1 NP_727442 NP_727442.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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