Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Metazoan Compara
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DB built by FlyBase

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Gene: ras FBgn0003204

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Description

raspberry

Gene Synonyms

Location

Primary_assembly X: 10,744,502-10,749,097 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants) and 121 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ras-RF	FBtr0474163	2415	590aa	FBpp0423162	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K3W6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ras-RD	FBtr0332294	2810	537aa	FBpp0304573	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V488 Q07152	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ras-RA	FBtr0071495	2519	537aa	FBpp0071424	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V488 Q07152	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ras-RE	FBtr0343043	2415	537aa	FBpp0309791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V488 Q07152	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ras-RC	FBtr0071494	2321	537aa	FBpp0071423	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V488 A9YKX5 F6J5F7 Q07152	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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