Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: stau FBgn0003520

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Description

staufen

Gene Synonyms

Location

Primary_assembly 2R: 18,117,896-18,125,779 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 85 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
stau-RA	FBtr0086783	5240	1026aa	FBpp0085962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P25159	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
stau-RB	FBtr0086784	4910	914aa	FBpp0085963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
stau-RC	FBtr0301614	3509	1025aa	FBpp0290829	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGK6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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