Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: RpL40 FBgn0003941

.

Description

Ribosomal protein L40

Gene Synonyms

Location

Primary_assembly 2L: 4,227,699-4,228,561 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 113 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RpL40-RB	FBtr0334787	659	128aa	FBpp0306837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18101 Q7JYK1	NM_001273089 NM_001273089.2 NM_057428.4 NP_001260018 NP_001260018.1 NP_476776.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpL40-RA	FBtr0077470	587	128aa	FBpp0077159	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18101 Q7JYK1	NM_001273089.2 NM_057428 NM_057428.4 NP_001260018.1 NP_476776 NP_476776.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.

Gene-based displays