Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: vap FBgn0003969

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Location

Chromosome X: 15,999,951-16,005,812 reverse strand.

BDGP6.28:AE014298.5

About this gene

This gene has 6 transcripts (splice variants), 113 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0340415	4340	954aa	FBpp0309361	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0340416	3845	954aa	FBpp0309362	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074142	3728	954aa	FBpp0089147	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074143	3649	954aa	FBpp0089148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23 Q8T9B1	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074141	3543	954aa	FBpp0073946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074140	3426	954aa	FBpp0073945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR23	NM_001298385.1 NM_001298386.1 NM_078637.3 NM_167480.2 NM_167481.3 NM_206759.2 NP_001285314.1 NP_001285315.1 NP_523361.1 NP_727925.1 NP_727926.2 NP_996482.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays