Summary
- Splice variants
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DB built by FlyBase

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Gene: Syt1 FBgn0004242

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Description

Synaptotagmin 1

Location

Primary_assembly 2L: 2,772,327-2,799,979 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 8 transcripts (splice variants), 121 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Syt1-RI	FBtr0345331	5872	472aa	FBpp0311487	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J4C1	NM_001298639 NM_001298639.1 NM_164501.2 NM_164502.2 NP_001285568 NP_001285568.1 NP_722838.1 NP_722839.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Syt1-RE	FBtr0332218	5196	472aa	FBpp0304523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_205897 NM_205897.2 NP_995619 NP_995619.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Syt1-RC	FBtr0077728	5110	472aa	FBpp0077412	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J4C1	NM_001298639.1 NM_164501.2 NM_164502 NM_164502.2 NP_001285568.1 NP_722838.1 NP_722839 NP_722839.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Syt1-RG	FBtr0332220	4593	331aa	FBpp0304525	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001370000 NP_001356906
Syt1-RF	FBtr0332219	4548	170aa	FBpp0304524	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001273036 NM_001273036.1 NP_001259965 NP_001259965.1
Syt1-RA	FBtr0077726	3993	474aa	FBpp0077410	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P21521	NM_001273036.1 NM_001273037.1 NM_001298639.1 NM_078736 NM_078736.3 NM_164501.2 NM_164502.2 NM_205897.2 NP_001259965.1 NP_001259966.1 NP_001285568.1 NP_523460 NP_523460.2 NP_722838.1 NP_722839.1 NP_995619.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Syt1-RH	FBtr0343993	3990	473aa	FBpp0310442	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J979	NM_001298638 NM_001298638.1 NP_001285567 NP_001285567.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Syt1-RB	FBtr0077727	3987	472aa	FBpp0077411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J4C1	NM_001298639.1 NM_164501 NM_164501.2 NM_164502.2 NP_001285568.1 NP_722838 NP_722838.1 NP_722839.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays