Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
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- Gene history

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DB built by FlyBase

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Gene: svr FBgn0004648

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Description

silver

Location

Primary_assembly X: 496,446-509,072 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 11 transcripts (splice variants), 120 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
svr-RD	FBtr0070084	5904	1404aa	FBpp0089123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_206599 NM_206599.2 NP_996322 NP_996322.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
svr-RB	FBtr0070081	5890	1406aa	FBpp0070080	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P42787	NM_001144669.2 NM_001297813.1 NM_001297814.1 NM_001297815.1 NM_080293 NM_080293.4 NM_166846.5 NM_176679.3 NM_206596.2 NM_206597.2 NM_206598.3 NM_206599.2 NP_001138141.1 NP_001284742.1 NP_001284743.1 NP_001284744.1 NP_525032 NP_525032.2 NP_726675.3 NP_788852.2 NP_996319.1 NP_996320.1 NP_996321.1 NP_996322.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
svr-RH	FBtr0290016	5842	1437aa	FBpp0288455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_166846 NM_166846.5 NP_726675 NP_726675.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
svr-RG	FBtr0070087	5828	1439aa	FBpp0089126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J9Z1	NM_001297815.1 NM_206596 NM_206596.2 NP_001284744.1 NP_996319 NP_996319.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
svr-RM	FBtr0344738	5611	1406aa	FBpp0311070	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P42787	NM_001144669.2 NM_001297813.1 NM_001297814.1 NM_001297815.1 NM_080293.4 NM_166846.5 NM_176679 NM_176679.3 NM_206596.2 NM_206597.2 NM_206598.3 NM_206599.2 NP_001138141.1 NP_001284742.1 NP_001284743.1 NP_001284744.1 NP_525032.2 NP_726675.3 NP_788852 NP_788852.2 NP_996319.1 NP_996320.1 NP_996321.1 NP_996322.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
svr-RI	FBtr0290017	5267	1292aa	FBpp0288456	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001144669 NM_001144669.2 NP_001138141 NP_001138141.1
svr-RN	FBtr0344739	4986	1439aa	FBpp0311071	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J9Z1	NM_001297815 NM_001297815.1 NM_206596.2 NP_001284744 NP_001284744.1 NP_996319.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
svr-RE	FBtr0070085	3144	433aa	FBpp0089124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AWJ5	NM_001297813.1 NM_206598 NM_206598.3 NP_001284742.1 NP_996321 NP_996321.1
svr-RF	FBtr0070086	3130	435aa	FBpp0089125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DME3	NM_001297814.1 NM_206597 NM_206597.2 NP_001284743.1 NP_996320 NP_996320.1
svr-RJ	FBtr0340146	3092	433aa	FBpp0309132	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AWJ5	NM_001297813 NM_001297813.1 NM_206598.3 NP_001284742 NP_001284742.1 NP_996321.1
svr-RL	FBtr0344737	2851	435aa	FBpp0311069	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DME3	NM_001297814 NM_001297814.1 NM_206597.2 NP_001284743 NP_001284743.1 NP_996320.1

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Summary

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Gene-based displays