Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: ple FBgn0005626

.

Description

pale

Location

Primary_assembly 3L: 6,713,356-6,719,525 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 117 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ple-RC	FBtr0345585	3806	579aa	FBpp0311654	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5X0J4 P18459	NM_001300026 NM_001300026.1 NM_057549.3 NM_057550.4 NP_001286955 NP_001286955.1 NP_476897.1 NP_476898.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
ple-RB	FBtr0076957	3124	579aa	FBpp0076666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5X0J4 P18459	NM_001300026.1 NM_057549.3 NM_057550 NM_057550.4 NP_001286955.1 NP_476897.1 NP_476898 NP_476898.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
ple-RA	FBtr0076956	2911	508aa	FBpp0076665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_057549 NM_057549.3 NP_476897 NP_476897.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays