Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
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DB built by FlyBase

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Gene: Rox8 FBgn0005649

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Description

Rox8

Gene Synonyms

Location

Primary_assembly 3R: 24,043,056-24,048,265 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 6 transcripts (splice variants), 171 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rox8-RH	FBtr0333202	3370	470aa	FBpp0305404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMX4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Rox8-RG	FBtr0333201	3328	470aa	FBpp0305403	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMX4	-	-
Rox8-RD	FBtr0084591	3300	470aa	FBpp0083976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMX4	-	-
Rox8-RC	FBtr0084594	3298	464aa	FBpp0083979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08212 Q9VCE3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Rox8-RE	FBtr0333200	3222	470aa	FBpp0305402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IMX4 Q8SZP5	-	-
Rox8-RB	FBtr0084592	3218	464aa	FBpp0083977	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCE3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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