Summary
- Splice variants
- Transcript comparison
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Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: Os-C FBgn0010401

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Description

Os-C

Gene Synonyms

Location

Primary_assembly 3R: 7,978,959-7,979,614 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Os-C-RB	FBtr0300320	604	153aa	FBpp0289548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ83	NM_001170072 NM_001170072.2 NP_001163543 NP_001163543.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Os-C-RC	FBtr0300321	550	135aa	FBpp0289549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q23971	NM_141496 NM_141496.3 NP_649753 NP_649753.3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Os-C-RD	FBtr0331341	538	131aa	FBpp0303759	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFT1	NM_001275428 NM_001275428.1 NP_001262357 NP_001262357.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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