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DB built by FlyBase

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Gene: Deaf1 FBgn0013799

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Description

Deformed epidermal autoregulatory factor-1

Gene Synonyms

Location

Primary_assembly 3L: 19,818,174-19,830,686 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 145 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Deaf1-RD	FBtr0332153	3588	576aa	FBpp0304463	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD02 Q24180	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Deaf1-RA	FBtr0074882	2425	576aa	FBpp0074651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD02 Q24180	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Deaf1-RB	FBtr0100666	2416	573aa	FBpp0100128	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86LC7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Deaf1-RC	FBtr0310476	2042	539aa	FBpp0302624	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH34	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Deaf1-RE	FBtr0332726	2033	536aa	FBpp0304972	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFP9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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