Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Vsp37A FBgn0016038

.

Description

Vacuolar protein sorting 37A

Location

Primary_assembly X: 621,530-623,051 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 6 transcripts (splice variants), 74 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Vsp37A-RA	FBtr0089726	1343	200aa	FBpp0088667	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77259	NM_001272172.1 NM_080295 NM_080295.3 NM_166848.2 NP_001259101.1 NP_525034 NP_525034.2 NP_726679.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Vsp37A-RC	FBtr0089725	1332	200aa	FBpp0088666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77259 Q9N6W9	NM_001272172.1 NM_080295.3 NM_166848 NM_166848.2 NP_001259101.1 NP_525034.2 NP_726679 NP_726679.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Vsp37A-RD	FBtr0089724	1331	196aa	FBpp0088665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA5	NM_001272171.1 NM_166849.2 NM_166850 NM_166850.2 NP_001259100.1 NP_726680.1 NP_726681 NP_726681.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Vsp37A-RE	FBtr0335122	1323	196aa	FBpp0307122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA5	NM_001272171 NM_001272171.1 NM_166849.2 NM_166850.2 NP_001259100 NP_001259100.1 NP_726680.1 NP_726681.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Vsp37A-RF	FBtr0335123	1294	200aa	FBpp0307123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77259	NM_001272172 NM_001272172.1 NM_080295.3 NM_166848.2 NP_001259101 NP_001259101.1 NP_525034.2 NP_726679.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Vsp37A-RB	FBtr0089723	1099	196aa	FBpp0088664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA5	NM_001272171.1 NM_166849 NM_166849.2 NM_166850.2 NP_001259100.1 NP_726680 NP_726680.1 NP_726681.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays