Description
Smg5 nonsense mediated mRNA decay factor
Gene Synonyms
Location
Primary_assembly 2L: 13,898,828-13,904,661 reverse strand.
BDGP6.46:AE014134.6
About this gene
This gene has 3 transcripts (splice variants) and 69 orthologues.
Transcripts
.
.
Smg5 nonsense mediated mRNA decay factor
Primary_assembly 2L: 13,898,828-13,904,661 reverse strand.
BDGP6.46:AE014134.6
This gene has 3 transcripts (splice variants) and 69 orthologues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
Smg5-RB | FBtr0080562 | 4809 | 1177aa | FBpp0080139 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V414 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
Smg5-RC | FBtr0343669 | 4102 | 1177aa | FBpp0310261 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V414 | - | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
Smg5-RA | FBtr0080561 | 4021 | 1177aa | FBpp0080138 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8T080 Q95TL1 Q9V414 | - | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
.
Ensembl Metazoa release 58 - January 2024 © EMBL-EBI EMBL-EBI
.
.