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DB built by FlyBase

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Gene: dom FBgn0020306

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Description

domino

Gene Synonyms

Location

Primary_assembly 2R: 21,323,430-21,341,847 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 73 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
dom-RG	FBtr0342890	10626	3233aa	FBpp0309691	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFX8 B3DN49 Q1WWH4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
dom-RA	FBtr0071603	10521	3198aa	FBpp0071529	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJR0 Q8MT92 Q9NDJ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dom-RD	FBtr0071602	10178	3183aa	FBpp0071528	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLW2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dom-RE	FBtr0071604	8619	2497aa	FBpp0071530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9UN97 B5RJJ7 Q960W1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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