ER degradation enhancer, mannosidase alpha-like 1
Primary_assembly X: 1,903,704-1,908,827 reverse strand.
BDGP6.32:AE014298.5
This gene has 5 transcripts (splice variants), 127 orthologues and 4 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Edem1-RE | FBtr0332580 | 3883 | 1004aa | FBpp0304832 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PG98 O46091 | NM_001272223 NM_001272223.2 NP_001259152 NP_001259152.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Edem1-RC | FBtr0070352 | 4251 | 982aa | FBpp0070337 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JUF8 | NM_001258554.2 NM_130603.3 NM_166914.2 NM_166915 NM_166915.2 NP_001245483.1 NP_569959.1 NP_726777.1 NP_726778 NP_726778.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Edem1-RD | FBtr0305583 | 3935 | 982aa | FBpp0294034 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JUF8 | NM_001258554 NM_001258554.2 NM_130603.3 NM_166914.2 NM_166915.2 NP_001245483 NP_001245483.1 NP_569959.1 NP_726777.1 NP_726778.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Edem1-RA | FBtr0070354 | 3670 | 982aa | FBpp0070339 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JUF8 | NM_001258554.2 NM_130603.3 NM_166914 NM_166914.2 NM_166915.2 NP_001245483.1 NP_569959.1 NP_726777 NP_726777.1 NP_726778.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Edem1-RB | FBtr0070353 | 3221 | 982aa | FBpp0070338 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JUF8 | NM_001258554.2 NM_130603 NM_130603.3 NM_166914.2 NM_166915.2 NP_001245483.1 NP_569959 NP_569959.1 NP_726777.1 NP_726778.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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