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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: trio FBgn0024277

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Description

trio

Gene Synonyms

Location

Primary_assembly 3L: 995,982-1,034,875 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 7 transcripts (splice variants), 65 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
trio-RC	FBtr0072645	9510	2263aa	FBpp0072540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVD1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
trio-RA	FBtr0072644	9245	2263aa	FBpp0072539	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP86 Q7KVD1 Q7KY09 Q9W0L0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
trio-RD	FBtr0072646	4904	804aa	FBpp0072541	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRI5	-	-
trio-RB	FBtr0072647	4187	658aa	FBpp0072542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA0 Q8T987	-	-
trio-RE	FBtr0072648	3466	398aa	FBpp0072543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV43 Q8IRI4	-	-
trio-RF	FBtr0072649	2959	658aa	FBpp0089283	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA0	-	-
trio-RG	FBtr0481695	2499	522aa	FBpp0428455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IH76	-	-

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Summary

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