Summary
- Splice variants
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DB built by FlyBase

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Gene: trio FBgn0024277

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Description

trio

Gene Synonyms

Location

Primary_assembly 3L: 995,982-1,034,875 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 126 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
trio-RC	FBtr0072645	9510	2263aa	FBpp0072540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP86 Q7KVD1 Q7KY09 Q9W0L0	NM_143703.3 NM_167847 NM_167847.2 NP_651960.2 NP_728560 NP_728560.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
trio-RA	FBtr0072644	9245	2263aa	FBpp0072539	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVD1	NM_143703 NM_143703.3 NM_167847.2 NP_651960 NP_651960.2 NP_728560.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
trio-RD	FBtr0072646	4904	804aa	FBpp0072541	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRI5	NM_167848 NM_167848.2 NP_728561 NP_728561.1	-
trio-RB	FBtr0072647	4187	658aa	FBpp0072542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA0	NM_167849 NM_167849.2 NM_206228.2 NP_728562 NP_728562.1 NP_995950.1	-
trio-RE	FBtr0072648	3466	398aa	FBpp0072543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV43 Q8IRI4	NM_167850 NM_167850.2 NP_728563 NP_728563.1	-
trio-RF	FBtr0072649	2959	658aa	FBpp0089283	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZA0 Q8IH76 Q8T987	NM_167849.2 NM_206228 NM_206228.2 NP_728562.1 NP_995950 NP_995950.1	-

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Summary

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Gene-based displays