Summary
- Splice variants
- Transcript comparison
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Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Protostomes)
- Gene tree (Insects)
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- Orthologues
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Pan-taxonomic Compara
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- Structural variants
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DB built by FlyBase

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Gene: Tnpo FBgn0024921

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Description

Transportin

Gene Synonyms

Location

Primary_assembly 3L: 6,193,480-6,200,385 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 23 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tnpo-RA	FBtr0077000	5496	893aa	FBpp0076708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VRV8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tnpo-RD	FBtr0333059	5414	893aa	FBpp0305273	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O76331 Q86PD5 Q8MSW8 Q8SX88 Q9VRV8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tnpo-RB	FBtr0077001	4704	893aa	FBpp0076709	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VRV8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tnpo-RC	FBtr0077002	4666	893aa	FBpp0076710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VRV8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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