Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: RhoGAPp190 FBgn0026375

.

Description

Rho GTPase activating protein p190

Gene Synonyms

Location

Primary_assembly X: 17,639,147-17,652,562 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 7 transcripts (splice variants), 165 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RhoGAPp190-RF	FBtr0333661	7411	1621aa	FBpp0305817	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHV3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
RhoGAPp190-RE	FBtr0333660	7693	1579aa	FBpp0305816	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHY4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAPp190-RC	FBtr0074482	7639	1561aa	FBpp0074256	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C5KMR0 D1Z398 Q9VX32	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAPp190-RA	FBtr0074483	7348	1561aa	FBpp0074257	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C5KMR0 Q9VX32	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAPp190-RD	FBtr0333659	7301	1564aa	FBpp0305815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHG0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAPp190-RG	FBtr0333662	6742	1398aa	FBpp0305818	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAPp190-RB	FBtr0074481	5872	1561aa	FBpp0074255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C5KMR0 Q9VX32	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.