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DB built by FlyBase

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Gene: Ankle2 FBgn0028343

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Description

Ankyrin repeat and LEM domain containing 2

Gene Synonyms

Location

Primary_assembly X: 17,571,854-17,579,229 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 143 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ankle2-RE	FBtr0301414	3876	1174aa	FBpp0290628	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MQX9	NM_001298446.1 NM_132993.3 NM_167569 NM_167569.2 NM_167570.2 NP_001285375.1 NP_573221.2 NP_728082 NP_728082.2 NP_728083.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Ankle2-RD	FBtr0301413	3870	1174aa	FBpp0290627	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MQX9	NM_001298446.1 NM_132993 NM_132993.3 NM_167569.2 NM_167570.2 NP_001285375.1 NP_573221 NP_573221.2 NP_728082.2 NP_728083.2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Ankle2-RG	FBtr0340625	3855	1169aa	FBpp0309489	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCC5	NM_001298446 NM_001298446.1 NP_001285375 NP_001285375.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Ankle2-RF	FBtr0301415	3569	1110aa	FBpp0290629	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX44	NM_167570 NM_167570.2 NP_728083 NP_728083.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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