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- Splice variants
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DB built by FlyBase

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Gene: Rh50 FBgn0028699

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Description

Rh50

Gene Synonyms

Location

Primary_assembly 3L: 4,910,368-4,920,198 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 232 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rh50-RD	FBtr0479763	2357	501aa	FBpp0428106	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q9I2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Rh50-RB	FBtr0331423	2773	460aa	FBpp0303840	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQN0 M9PEN8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Rh50-RC	FBtr0345597	1974	460aa	FBpp0311666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEN8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Rh50-RA	FBtr0073354	1836	449aa	FBpp0073210	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3T3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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