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- Splice variants
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DB built by FlyBase

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Gene: Spn38F FBgn0028986

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Description

Serpin 38F

Gene Synonyms

Location

Primary_assembly 2L: 20,836,621-20,837,985 reverse strand.

BDGP6.54:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 39 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Spn38F-RA	FBtr0081450	1198	372aa	FBpp0080979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSJ3 Q9U1I6 Q9VII7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Spn38F-RB	FBtr0339567	1192	370aa	FBpp0308646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAJ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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