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Summary
- Splice variants
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DB built by FlyBase

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Gene: CG5921 FBgn0029835

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Gene Synonyms

Location

Primary_assembly X: 6,050,828-6,065,646 forward strand.

BDGP6.54:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 27 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5921-RD	FBtr0305343	3373	886aa	FBpp0293886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W443	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG5921-RC	FBtr0305342	4361	829aa	FBpp0293885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRR2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG5921-RE	FBtr0336972	2827	728aa	FBpp0307915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3WE44 M9PJ67	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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