Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG9650 FBgn0029939

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Location

Primary_assembly X: 7,137,723-7,241,932 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 112 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9650-RI	FBtr0309030	6934	1207aa	FBpp0301059	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q494J4 R9PY46	NM_167121 NM_167121.3 NP_727173 NP_727173.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9650-RG	FBtr0301240	6154	1209aa	FBpp0290458	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JV12 G2J654	NM_001103429 NM_001103429.5 NP_001096899 NP_001096899.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9650-RK	FBtr0474234	5755	1254aa	FBpp0423187	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A499JF18 A9YJL2	NM_001370055	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG9650-RL	FBtr0474235	5755	1213aa	FBpp0423188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JV11 B4YWD6 C7LA65	NM_001103430 NM_001103430.4 NP_001096900.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9650-RJ	FBtr0339815	5637	1140aa	FBpp0308848	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023GPJ3 F6JBF5	NM_132157 NM_132157.2 NP_572385 NP_572385.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays