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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: CG2004 FBgn0030060

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Gene Synonyms

Location

Primary_assembly X: 8,712,472-8,714,924 reverse strand.

BDGP6.54:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 6 orthologues and 49 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2004-RG	FBtr0346167	1920	425aa	FBpp0311995	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3C3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG2004-RD	FBtr0332958	1729	425aa	FBpp0305174	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG2004-RA	FBtr0071281	1659	425aa	FBpp0071218	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG2004-RC	FBtr0332957	1640	425aa	FBpp0305173	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG2004-RF	FBtr0332960	1509	425aa	FBpp0305176	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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