Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5445 FBgn0030838

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Location

Primary_assembly X: 17,282,496-17,305,475 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants) and 114 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5445-RG	FBtr0339778	2047	303aa	FBpp0308825	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX56	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5445-RD	FBtr0074428	1995	303aa	FBpp0074202	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX56	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5445-RA	FBtr0074427	1943	303aa	FBpp0074201	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX56	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5445-RF	FBtr0339777	1740	303aa	FBpp0308824	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX56	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5445-RB	FBtr0074425	1664	303aa	FBpp0074199	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX56	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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