Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Rcd-1 FBgn0031047

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Description

Required for cell differentiation 1

Gene Synonyms

Location

Primary_assembly X: 19,638,767-19,640,746 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 121 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rcd-1-RA	FBtr0074744	1612	304aa	FBpp0074513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVP2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Rcd-1-RC	FBtr0334277	1725	301aa	FBpp0306392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF85	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Rcd-1-RB	FBtr0074743	1544	304aa	FBpp0074512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVP2	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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