Summary
- Splice variants
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Rcd-1 FBgn0031047

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Description

Required for cell differentiation 1

Gene Synonyms

Location

Primary_assembly X: 19,638,767-19,640,746 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rcd-1-RA	FBtr0074744	1612	304aa	FBpp0074513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVP2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Rcd-1-RC	FBtr0334277	1725	301aa	FBpp0306392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF85	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Rcd-1-RB	FBtr0074743	1544	304aa	FBpp0074512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVP2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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