Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
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Pathway
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External references
Supporting evidence
ID History
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DB built by FlyBase

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Gene: CG1504 FBgn0031100

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Gene Synonyms

Location

Primary_assembly X: 20,302,015-20,330,372 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 86 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1504-RD	FBtr0335041	4635	425aa	FBpp0307045	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VR83	NM_001272813.1 NM_001272814 NM_001272814.1 NM_001272815.1 NM_134538.3 NP_001259742.1 NP_001259743 NP_001259743.1 NP_001259744.1 NP_608382.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1504-RE	FBtr0335042	4255	425aa	FBpp0307046	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1NZD8 F6JQ71 F6JQ72 F6JQ75 F6JQ79 F6JQ80 F6JQ81 Q9VR83	NM_001272813.1 NM_001272814.1 NM_001272815 NM_001272815.1 NM_134538.3 NP_001259742.1 NP_001259743.1 NP_001259744 NP_001259744.1 NP_608382.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1504-RC	FBtr0335040	2530	425aa	FBpp0307044	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VR83	NM_001272813 NM_001272813.1 NM_001272814.1 NM_001272815.1 NM_134538.3 NP_001259742 NP_001259742.1 NP_001259743.1 NP_001259744.1 NP_608382.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1504-RB	FBtr0306678	1920	425aa	FBpp0297617	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VR83	NM_001272813.1 NM_001272814.1 NM_001272815.1 NM_134538 NM_134538.3 NP_001259742.1 NP_001259743.1 NP_001259744.1 NP_608382 NP_608382.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays