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DB built by FlyBase

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Gene: RhoGAP19D FBgn0031118

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Description

Rho GTPase activating protein at 19D

Gene Synonyms

Location

Primary_assembly X: 20,469,955-20,510,694 reverse strand.

BDGP6.54:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 74 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RhoGAP19D-RD	FBtr0340405	9502	2206aa	FBpp0309351	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JEI9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
RhoGAP19D-RC	FBtr0304906	9289	2135aa	FBpp0293445	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFH4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAP19D-RB	FBtr0301537	9211	2109aa	FBpp0290752	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJS2 Q6IDH3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAP19D-RE	FBtr0345015	8804	2135aa	FBpp0311266	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFH4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
RhoGAP19D-RA	FBtr0077320	7735	2181aa	FBpp0077012	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TR0 Q9VRA6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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