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DB built by FlyBase

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Gene: LUBEL FBgn0031857

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Description

Linear Ubiquitin E3 ligase

Gene Synonyms

Location

Primary_assembly 2L: 6,759,829-6,772,755 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 9 transcripts (splice variants) and 125 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LUBEL-RE	FBtr0331216	9188	2892aa	FBpp0303658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPJ3	NM_001273227.1 NM_001273228.2 NM_001273230.2 NM_001273231.2 NM_135228.4 NM_164709 NM_164709.4 NP_001260156.1 NP_001260157.1 NP_001260159.1 NP_001260160.1 NP_609072.2 NP_723214 NP_723214.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
LUBEL-RG	FBtr0331218	9186	2851aa	FBpp0303660	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PB55	NM_001273228 NM_001273228.2 NP_001260157 NP_001260157.1	-
LUBEL-RI	FBtr0331220	9009	2839aa	FBpp0303662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCS0	NM_001273230 NM_001273230.2 NP_001260159 NP_001260159.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
LUBEL-RJ	FBtr0331221	8906	2798aa	FBpp0303663	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCD7	NM_001273231 NM_001273231.2 NP_001260160 NP_001260160.1	-
LUBEL-RH	FBtr0331219	2907	887aa	FBpp0303661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC77	NM_001273229 NM_001273229.2 NP_001260158 NP_001260158.1	-
LUBEL-RF	FBtr0331217	2882	834aa	FBpp0303659	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P90 Q9VM88	NM_001273227 NM_001273227.1 NM_135228.4 NP_001260156 NP_001260156.1 NP_609072.2	-
LUBEL-RC	FBtr0290295	2768	834aa	FBpp0288734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM88	NM_001273227.1 NM_135228 NM_135228.4 NP_001260156.1 NP_609072 NP_609072.2	-
LUBEL-RD	FBtr0301972	783	180aa	FBpp0291182	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHA3	NM_001169425 NM_001169425.2 NM_001273232.2 NP_001162896 NP_001162896.1 NP_001260161.1	-
LUBEL-RK	FBtr0331222	763	180aa	FBpp0303664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9UN74 E1JHA3	NM_001169425.2 NM_001273232 NM_001273232.2 NP_001162896.1 NP_001260161 NP_001260161.1	-

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Summary

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Gene-based displays