Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG10600 FBgn0032717

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Location

Primary_assembly 2L: 18,833,710-18,839,679 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 71 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG10600-RB	FBtr0273228	5295	1406aa	FBpp0271736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZX6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG10600-RA	FBtr0081120	5208	1377aa	FBpp0080665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJ42	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG10600-RC	FBtr0331194	5137	1376aa	FBpp0303621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PG55	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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