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DB built by FlyBase

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Gene: CdGAPr FBgn0032821

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Description

Cd GTPase activating protein-related

Gene Synonyms

Location

Primary_assembly 2L: 19,774,874-19,791,882 reverse strand.

BDGP6.54:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 70 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CdGAPr-RD	FBtr0332179	7824	1843aa	FBpp0304488	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDR8 Q9VIS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CdGAPr-RA	FBtr0081318	7522	1843aa	FBpp0080851	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDR8 Q9VIS1	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CdGAPr-RB	FBtr0300966	6366	1842aa	FBpp0290188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHM1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CdGAPr-RC	FBtr0300967	6360	1840aa	FBpp0290189	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHM0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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