Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: sky FBgn0032901

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Description

skywalker

Gene Synonyms

Location

Primary_assembly 2L: 20,871,335-20,918,931 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 12 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sky-RJ	FBtr0330255	5002	607aa	FBpp0303287	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DML7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
sky-RK	FBtr0330256	5158	597aa	FBpp0303288	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDV9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RB	FBtr0081442	5128	587aa	FBpp0080971	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIH7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RH	FBtr0081447	5080	587aa	FBpp0080976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIH7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RE	FBtr0081443	5071	568aa	FBpp0080972	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8N9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RD	FBtr0081446	5023	568aa	FBpp0080975	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8N9 Q6Q4F0	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RL	FBtr0330257	4921	606aa	FBpp0303289	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDI9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RA	FBtr0081441	4920	587aa	FBpp0080970	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIH7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RG	FBtr0081440	4863	568aa	FBpp0080969	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8N9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
sky-RC	FBtr0081444	4758	592aa	FBpp0080973	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIH6	-	-
sky-RI	FBtr0301961	4658	573aa	FBpp0291173	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YD53 Q6Q4F1 Q8MT51	-	-
sky-RF	FBtr0081445	3041	573aa	FBpp0080974	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MT51	-	-

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Summary

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