CAP
Primary_assembly 2R: 10,269,016-10,307,024 forward strand.
BDGP6.32:AE013599.5
This gene has 28 transcripts (splice variants) and 16 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CAP-RAC | FBtr0479879 | 9023 | 2568aa | FBpp0428212 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6M3QH40 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CAP-RAB | FBtr0479878 | 8885 | 2522aa | FBpp0428211 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6M3Q831 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 | - |
| CAP-RAE | FBtr0479881 | 8876 | 2519aa | FBpp0428214 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6M3Q762 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 | - |
| CAP-RX | FBtr0336695 | 8834 | 2505aa | FBpp0307676 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K7L3 | NM_001259310 NM_001259310.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001246239 NP_001246239.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RV | FBtr0306691 | 8693 | 2458aa | FBpp0297630 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6W0 | NM_001259312 NM_001259312.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001246241 NP_001246241.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RQ | FBtr0301131 | 8555 | 2412aa | FBpp0290354 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1A6U0 A8WHG7 B7YZD8 | NM_001144166 NM_001144166.3 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001137638 NP_001137638.2 | - |
| CAP-RY | FBtr0336696 | 8546 | 2409aa | FBpp0307677 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KEH7 | NM_001273931 NM_001273931.1 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001260860 NP_001260860.1 | - |
| CAP-RA | FBtr0088341 | 8447 | 2376aa | FBpp0087430 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z867 Q966V1 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NM_136727 NM_136727.4 NP_610571 NP_610571.2 | - |
| CAP-RL | FBtr0299826 | 8414 | 2365aa | FBpp0289104 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZD9 | NM_001144165 NM_001144165.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001137637 NP_001137637.1 | - |
| CAP-RP | FBtr0299830 | 6531 | 1883aa | FBpp0289108 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZE0 | NM_001144169 NM_001144169.2 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001137641 NP_001137641.1 | - |
| CAP-RR | FBtr0301965 | 6232 | 1743aa | FBpp0291177 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q966V0 | NM_001169639 NM_001169639.2 NM_001382041.1 NP_001163110 NP_001163110.1 | - |
| CAP-RB | FBtr0088344 | 6205 | 1734aa | FBpp0087433 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z871 | NM_001382041.1 NM_165760 NM_165760.4 NP_724913 NP_724913.2 | - |
| CAP-RAD | FBtr0479880 | 5858 | 1696aa | FBpp0428213 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6M3Q7N5 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 | - |
| CAP-RW | FBtr0336694 | 5528 | 1586aa | FBpp0307675 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KEJ6 | NM_001273930 NM_001273930.1 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001260859 NP_001260859.1 | - |
| CAP-RAA | FBtr0479877 | 3579 | 834aa | FBpp0428210 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6M3Q951 | NM_001382041.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RG | FBtr0088340 | 3521 | 500aa | FBpp0087429 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7K1M7 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NM_136728.4 NM_165759 NM_165759.3 NP_610572.1 NP_724912 NP_724912.1 | - |
| CAP-RF | FBtr0088342 | 3510 | 811aa | FBpp0087431 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z869 | NM_001382041.1 NM_165758 NM_165758.2 NP_724911 NP_724911.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RC | FBtr0088343 | 3322 | 824aa | FBpp0087432 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JR75 Q966U9 | NM_001382041.1 NM_165757 NM_165757.3 NP_724910 NP_724910.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RK | FBtr0299825 | 3301 | 630aa | FBpp0289103 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86P80 | NM_001144164 NM_001144164.2 NM_001144168.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001137636 NP_001137636.1 NP_001137640.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RN | FBtr0299828 | 3157 | 313aa | FBpp0289106 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q966U7 | NM_001144167 NM_001144167.1 NM_165762.3 NP_001137639 NP_001137639.1 NP_724915.1 | - |
| CAP-RU | FBtr0306690 | 2872 | 674aa | FBpp0297629 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K7W2 | NM_001259311 NM_001259311.2 NM_001382041.1 NP_001246240 NP_001246240.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RO | FBtr0299829 | 2824 | 630aa | FBpp0289107 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86P80 | NM_001144164.2 NM_001144168 NM_001144168.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001137636.1 NP_001137640 NP_001137640.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CAP-RJ | FBtr0088347 | 2702 | 565aa | FBpp0087436 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z870 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NM_206073 NM_206073.3 NP_995795 NP_995795.1 | - |
| CAP-RI | FBtr0088338 | 2663 | 639aa | FBpp0087427 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z866 Q8IGN4 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NM_136726 NM_136726.3 NP_610570 NP_610570.1 | - |
| CAP-RH | FBtr0088339 | 2578 | 500aa | FBpp0087428 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7K1M7 | NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NM_136728 NM_136728.4 NM_165759.3 NP_610572 NP_610572.1 NP_724912.1 | - |
| CAP-RS | FBtr0306688 | 2384 | 554aa | FBpp0297627 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3DMM3 | NM_001259309 NM_001259309.2 NM_001382041.1 NM_001382042.1 NM_001382043.1 NM_001382044.1 NM_001382045.1 NP_001246238 NP_001246238.1 | - |
| CAP-RD | FBtr0088345 | 2376 | 527aa | FBpp0087434 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1Z872 Q966U8 | NM_165761 NM_165761.2 NP_724914 NP_724914.1 | - |
| CAP-RE | FBtr0088346 | 1788 | 313aa | FBpp0087435 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q966U7 | NM_001144167.1 NM_165762 NM_165762.3 NP_001137639.1 NP_724915 NP_724915.1 | - |
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