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DB built by FlyBase

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Gene: SCCRO3 FBgn0033784

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Description

Squamous cell carcinoma-related oncogene 3

Gene Synonyms

Location

Primary_assembly 2R: 12,934,234-12,936,535 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 92 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SCCRO3-RC	FBtr0087803	2105	334aa	FBpp0086916	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8S1	NM_136984.4 NM_165962.4 NM_165963 NM_165963.3 NP_610828.2 NP_725243.1 NP_725244 NP_725244.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
SCCRO3-RB	FBtr0087804	2053	334aa	FBpp0086917	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8S1	NM_136984.4 NM_165962 NM_165962.4 NM_165963.3 NP_610828.2 NP_725243 NP_725243.1 NP_725244.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
SCCRO3-RA	FBtr0087805	2041	334aa	FBpp0086918	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8S1	NM_136984 NM_136984.4 NM_165962.4 NM_165963.3 NP_610828 NP_610828.2 NP_725243.1 NP_725244.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays