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Summary
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DB built by FlyBase

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Gene: Liprin-gamma FBgn0034720

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Description

Liprin-gamma

Gene Synonyms

Location

Primary_assembly 2R: 22,333,500-22,373,109 reverse strand.

BDGP6.54:AE013599.5

About this gene

This gene has 5 transcripts (splice variants) and 68 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Liprin-gamma-RC	FBtr0113106	4972	1152aa	FBpp0112019	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYM0 Q7YU47	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Liprin-gamma-RE	FBtr0342990	4809	1082aa	FBpp0309754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG34	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Liprin-gamma-RA	FBtr0071846	4703	1023aa	FBpp0071757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W263	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Liprin-gamma-RB	FBtr0071847	4656	1023aa	FBpp0071758	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W263	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Liprin-gamma-RD	FBtr0113107	3453	852aa	FBpp0112020	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYM1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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