Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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DB built by FlyBase

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Gene: CG3776 FBgn0035088

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Location

Primary_assembly 2R: 24,969,678-24,970,855 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 122 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3776-RB	FBtr0343504	1004	263aa	FBpp0310109	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0X3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG3776-RA	FBtr0072395	937	263aa	FBpp0072302	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0X3	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG3776-RC	FBtr0343505	751	201aa	FBpp0310110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHN1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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