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DB built by FlyBase

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Gene: p130CAS FBgn0035101

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Description

p130CAS

Gene Synonyms

Location

Primary_assembly 3L: 152,884-174,517 forward strand.

BDGP6.54:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 62 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
p130CAS-RD	FBtr0299864	3292	831aa	FBpp0289142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IJ58	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
p130CAS-RG	FBtr0301889	3439	793aa	FBpp0291103	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058V8 Q7KVE5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
p130CAS-RB	FBtr0072475	2696	568aa	FBpp0072377	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95U71	-	-
p130CAS-RF	FBtr0299866	2629	568aa	FBpp0289144	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95U71	-	-
p130CAS-RE	FBtr0299865	2585	567aa	FBpp0289143	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0H1	-	-

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Summary

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