Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Supporting evidence
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- Gene history

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DB built by FlyBase

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Gene: CG8001 FBgn0035268

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Location

Chromosome 3L: 1,756,159-1,759,208 forward strand.

BDGP6.28:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 109 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0072774	2687	748aa	FBpp0072657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W091	NM_001274354.1 NM_139400.2 NP_001261283.1 NP_647657.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0300292	2672	743aa	FBpp0289520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SX92	NM_001169853.1 NM_001274355.1 NP_001163324.1 NP_001261284.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0334073	2540	748aa	FBpp0306198	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W091	NM_001274354.1 NM_139400.2 NP_001261283.1 NP_647657.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0334074	2525	743aa	FBpp0306199	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SX92	NM_001169853.1 NM_001274355.1 NP_001163324.1 NP_001261284.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays