wallenda
Primary_assembly 3L: 19,624,406-19,635,783 reverse strand.
BDGP6.32:AE014296.5
This gene has 4 transcripts (splice variants), 111 orthologues and 11 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| wnd-RC | FBtr0074965 | 4512 | 977aa | FBpp0074733 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VW24 | NM_140880.3 NM_176362.2 NM_176363 NM_176363.3 NP_649137.3 NP_788540.1 NP_788541 NP_788541.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| wnd-RA | FBtr0074963 | 4384 | 977aa | FBpp0074731 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VW24 | NM_140880 NM_140880.3 NM_176362.2 NM_176363.3 NP_649137 NP_649137.3 NP_788540.1 NP_788541.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| wnd-RB | FBtr0074964 | 4307 | 977aa | FBpp0074732 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VW24 | NM_140880.3 NM_176362 NM_176362.2 NM_176363.3 NP_649137.3 NP_788540 NP_788540.1 NP_788541.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| wnd-RD | FBtr0302513 | 3645 | 950aa | FBpp0291675 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3DMF6 | NM_001202203 NM_001202203.1 NP_001189132 NP_001189132.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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