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DB built by FlyBase

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Gene: SCCRO4 FBgn0036967

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Description

Squamous cell carcinoma-related oncogene 4

Location

Primary_assembly 3L: 20,299,410-20,309,511 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 94 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SCCRO4-RB	FBtr0074838	1947	248aa	FBpp0074607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	NM_001300198.1 NM_140947.4 NM_168842 NM_168842.2 NP_001287127.1 NP_649204.2 NP_730510 NP_730510.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
SCCRO4-RD	FBtr0332775	1427	213aa	FBpp0305010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRX5	NM_001202210 NM_001202210.3 NP_001189139 NP_001189139.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
SCCRO4-RA	FBtr0074837	1295	248aa	FBpp0074606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	NM_001300198.1 NM_140947 NM_140947.4 NM_168842.2 NP_001287127.1 NP_649204 NP_649204.2 NP_730510.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
SCCRO4-RE	FBtr0344228	1289	248aa	FBpp0310634	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	NM_001300198 NM_001300198.1 NM_140947.4 NM_168842.2 NP_001287127 NP_001287127.1 NP_649204.2 NP_730510.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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