Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Metazoan Compara
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DB built by FlyBase

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Gene: CG7414 FBgn0037135

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Gene Synonyms

Location

Primary_assembly 3L: 21,824,740-21,827,856 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 187 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7414-RA	FBtr0078441	2544	638aa	FBpp0078095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z098 Q9VNX8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG7414-RC	FBtr0303245	2827	555aa	FBpp0292337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS45	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7414-RE	FBtr0303247	2602	555aa	FBpp0292339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS45	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7414-RD	FBtr0303246	2319	638aa	FBpp0292338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z098 Q9VNX8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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