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- Splice variants
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DB built by FlyBase

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Gene: MED31 FBgn0037262

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Description

Mediator complex subunit 31

Gene Synonyms

Location

Primary_assembly 3R: 4,641,963-4,643,292 forward strand.

BDGP6.54:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 64 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
MED31-RA	FBtr0078856	1098	204aa	FBpp0078496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6R3 Q8IH24	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
MED31-RD	FBtr0336456	1092	202aa	FBpp0307562	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG28	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
MED31-RB	FBtr0078857	823	204aa	FBpp0078497	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6R3 Q8IH24	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
MED31-RC	FBtr0305312	818	204aa	FBpp0293855	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6R3 Q8IH24	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
MED31-RE	FBtr0345249	678	199aa	FBpp0311426	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGM8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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