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Summary
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DB built by FlyBase

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Gene: Dmtn FBgn0037443

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Description

Dementin

Gene Synonyms

Location

Primary_assembly 3R: 6,389,162-6,405,895 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 59 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Dmtn-RH	FBtr0300261	2928	679aa	FBpp0289489	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ71	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Dmtn-RD	FBtr0289939	3827	638aa	FBpp0288377	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI21	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Dmtn-RF	FBtr0290326	3747	638aa	FBpp0288765	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI21	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Dmtn-RE	FBtr0289940	3463	638aa	FBpp0288378	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI21	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Dmtn-RG	FBtr0290327	2992	500aa	FBpp0288766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W3 Q960J3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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